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  <title>Create a Collection on GAMbler</title>
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  <description>Recent content in Create a Collection on GAMbler</description>
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<copyright>© Nicholas J Clark (2024)</copyright>
<lastBuildDate>Fri, 01 Jan 2021 00:00:00 +0000</lastBuildDate>
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<item>
  <title>Prework</title>
  <link>https://ecogambler.netlify.app/collection/prework/</link>
  <pubDate>Fri, 01 Jan 2021 00:00:00 +0000</pubDate>
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  <description>&lt;p&gt;Welcome to the &#xA;&lt;a href=&#34;https://ecogambler.netlify.app/&#34;&gt;Introducing Yourself Online&lt;/a&gt; workshop! We look forward to meeting you. Before attending the workshop, please complete the following prework.&lt;/p&gt;&#xA;&#xA;&#xA;&#xA;&#xA;&lt;h2 id=&#34;set-up-rstudio-cloud&#34;&gt;Set up RStudio Cloud&#xA;  &lt;a href=&#34;#set-up-rstudio-cloud&#34;&gt;&lt;svg class=&#34;anchor-symbol&#34; aria-hidden=&#34;true&#34; height=&#34;26&#34; width=&#34;26&#34; viewBox=&#34;0 0 22 22&#34; xmlns=&#34;http://www.w3.org/2000/svg&#34;&gt;&#xA;      &lt;path d=&#34;M0 0h24v24H0z&#34; fill=&#34;currentColor&#34;&gt;&lt;/path&gt;&#xA;      &lt;path d=&#34;M3.9 12c0-1.71 1.39-3.1 3.1-3.1h4V7H7c-2.76.0-5 2.24-5 5s2.24 5 5 5h4v-1.9H7c-1.71.0-3.1-1.39-3.1-3.1zM8 13h8v-2H8v2zm9-6h-4v1.9h4c1.71.0 3.1 1.39 3.1 3.1s-1.39 3.1-3.1 3.1h-4V17h4c2.76.0 5-2.24 5-5s-2.24-5-5-5z&#34;&gt;&lt;/path&gt;&#xA;    &lt;/svg&gt;&lt;/a&gt;&#xA;&lt;/h2&gt;&#xA;&lt;p&gt;Sign up for a free RStudio Cloud account at &#xA;&lt;a href=&#34;https://rstudio.cloud/&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;https://rstudio.cloud/&lt;/a&gt; before the workshop. I recommend logging in with an existing Google or GitHub account, if you have one (rather than creating a new account with another password you have to remember). I want you to be able to work from your own laptop in this workshop, but Cloud is an important back-up plan should you run into troubles.&lt;/p&gt;&#xA;&#xA;&#xA;&#xA;&#xA;&lt;h2 id=&#34;set-up-github&#34;&gt;Set up GitHub&#xA;  &lt;a href=&#34;#set-up-github&#34;&gt;&lt;svg class=&#34;anchor-symbol&#34; aria-hidden=&#34;true&#34; height=&#34;26&#34; width=&#34;26&#34; viewBox=&#34;0 0 22 22&#34; xmlns=&#34;http://www.w3.org/2000/svg&#34;&gt;&#xA;      &lt;path d=&#34;M0 0h24v24H0z&#34; fill=&#34;currentColor&#34;&gt;&lt;/path&gt;&#xA;      &lt;path d=&#34;M3.9 12c0-1.71 1.39-3.1 3.1-3.1h4V7H7c-2.76.0-5 2.24-5 5s2.24 5 5 5h4v-1.9H7c-1.71.0-3.1-1.39-3.1-3.1zM8 13h8v-2H8v2zm9-6h-4v1.9h4c1.71.0 3.1 1.39 3.1 3.1s-1.39 3.1-3.1 3.1h-4V17h4c2.76.0 5-2.24 5-5s-2.24-5-5-5z&#34;&gt;&lt;/path&gt;&#xA;    &lt;/svg&gt;&lt;/a&gt;&#xA;&lt;/h2&gt;&#xA;&lt;p&gt;We will be using GitHub in this workshop for version control and publishing. Sign up for a free GitHub.com account at &#xA;&lt;a href=&#34;https://github.com/join&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;https://github.com/join&lt;/a&gt; if you don&amp;rsquo;t already have one. Also:&lt;/p&gt;&#xA;&lt;ul&gt;&#xA;&lt;li&gt;&#xA;&lt;p&gt;Complete these &#xA;&lt;a href=&#34;https://happygitwithr.com/install-intro.html&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;installation instructions&lt;/a&gt;.&lt;/p&gt;&#xA;&lt;/li&gt;&#xA;&lt;li&gt;&#xA;&lt;p&gt;Test your connection between GitHub and RStudio following &#xA;&lt;a href=&#34;https://happygitwithr.com/connect-intro.html&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;these steps&lt;/a&gt;.&lt;/p&gt;&#xA;&lt;/li&gt;&#xA;&lt;li&gt;&#xA;&lt;p&gt;&lt;strong&gt;NOTE:&lt;/strong&gt; We &lt;em&gt;strongly recommend&lt;/em&gt; that if you are not already a fluent GitHub user you choose &#xA;&lt;a href=&#34;https://happygitwithr.com/credential-caching.html&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;HTTPS over SSH&lt;/a&gt;.&lt;/p&gt;&#xA;&lt;/li&gt;&#xA;&lt;/ul&gt;&#xA;&#xA;&#xA;&#xA;&#xA;&lt;h2 id=&#34;brush-up-on-markdown&#34;&gt;Brush up on markdown&#xA;  &lt;a href=&#34;#brush-up-on-markdown&#34;&gt;&lt;svg class=&#34;anchor-symbol&#34; aria-hidden=&#34;true&#34; height=&#34;26&#34; width=&#34;26&#34; viewBox=&#34;0 0 22 22&#34; xmlns=&#34;http://www.w3.org/2000/svg&#34;&gt;&#xA;      &lt;path d=&#34;M0 0h24v24H0z&#34; fill=&#34;currentColor&#34;&gt;&lt;/path&gt;&#xA;      &lt;path d=&#34;M3.9 12c0-1.71 1.39-3.1 3.1-3.1h4V7H7c-2.76.0-5 2.24-5 5s2.24 5 5 5h4v-1.9H7c-1.71.0-3.1-1.39-3.1-3.1zM8 13h8v-2H8v2zm9-6h-4v1.9h4c1.71.0 3.1 1.39 3.1 3.1s-1.39 3.1-3.1 3.1h-4V17h4c2.76.0 5-2.24 5-5s-2.24-5-5-5z&#34;&gt;&lt;/path&gt;&#xA;    &lt;/svg&gt;&lt;/a&gt;&#xA;&lt;/h2&gt;&#xA;&lt;p&gt;Please complete this &#xA;&lt;a href=&#34;https://commonmark.org/help/tutorial/&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;10-minute interactive tutorial on Markdown&lt;/a&gt;.&lt;/p&gt;&#xA;&#xA;&#xA;&#xA;&#xA;&lt;h2 id=&#34;installations&#34;&gt;Installations&#xA;  &lt;a href=&#34;#installations&#34;&gt;&lt;svg class=&#34;anchor-symbol&#34; aria-hidden=&#34;true&#34; height=&#34;26&#34; width=&#34;26&#34; viewBox=&#34;0 0 22 22&#34; xmlns=&#34;http://www.w3.org/2000/svg&#34;&gt;&#xA;      &lt;path d=&#34;M0 0h24v24H0z&#34; fill=&#34;currentColor&#34;&gt;&lt;/path&gt;&#xA;      &lt;path d=&#34;M3.9 12c0-1.71 1.39-3.1 3.1-3.1h4V7H7c-2.76.0-5 2.24-5 5s2.24 5 5 5h4v-1.9H7c-1.71.0-3.1-1.39-3.1-3.1zM8 13h8v-2H8v2zm9-6h-4v1.9h4c1.71.0 3.1 1.39 3.1 3.1s-1.39 3.1-3.1 3.1h-4V17h4c2.76.0 5-2.24 5-5s-2.24-5-5-5z&#34;&gt;&lt;/path&gt;&#xA;    &lt;/svg&gt;&lt;/a&gt;&#xA;&lt;/h2&gt;&#xA;&lt;p&gt;Please bring a laptop that has the following installed:&lt;/p&gt;&#xA;&lt;ul&gt;&#xA;&lt;li&gt;&#xA;&lt;p&gt;A recent version of R (&amp;gt;=3.6.0), which is available for free at &#xA;&lt;a href=&#34;https://cloud.r-project.org/&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;https://cloud.r-project.org/&lt;/a&gt;&lt;/p&gt;&#xA;&lt;/li&gt;&#xA;&lt;li&gt;&#xA;&lt;p&gt;A recent version of RStudio Desktop (&amp;gt;=1.4), available for free (&#xA;&lt;a href=&#34;https://www.rstudio.com/products/rstudio/download/#download&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;RStudio Desktop Open Source License&lt;/a&gt;). Read up on the latest version &#xA;&lt;a href=&#34;https://blog.rstudio.com/2021/01/19/announcing-rstudio-1-4/&#34; target=&#34;_blank&#34; rel=&#34;noopener&#34;&gt;here&lt;/a&gt;.&lt;/p&gt;&#xA;&lt;/li&gt;&#xA;&lt;li&gt;&#xA;&lt;p&gt;The R packages we will use, which you can install by connecting to the internet, opening RStudio, and running at the command line:&lt;/p&gt;&#xA;&lt;div class=&#34;highlight&#34;&gt;&lt;pre tabindex=&#34;0&#34; style=&#34;background-color:#fff;-moz-tab-size:4;-o-tab-size:4;tab-size:4;&#34;&gt;&lt;code class=&#34;language-r&#34; data-lang=&#34;r&#34;&gt;&lt;span style=&#34;display:flex;&#34;&gt;&lt;span&gt;&lt;span style=&#34;color:#000;font-weight:bold&#34;&gt;&amp;gt;&lt;/span&gt; &lt;span style=&#34;color:#900;font-weight:bold&#34;&gt;install.packages&lt;/span&gt;(&lt;span style=&#34;color:#900;font-weight:bold&#34;&gt;c&lt;/span&gt;(&lt;span style=&#34;color:#d14&#34;&gt;&amp;#34;usethis&amp;#34;&lt;/span&gt;, &lt;span style=&#34;color:#d14&#34;&gt;&amp;#34;remotes&amp;#34;&lt;/span&gt;, &lt;span style=&#34;color:#d14&#34;&gt;&amp;#34;distill&amp;#34;&lt;/span&gt;, &#xA;&lt;/span&gt;&lt;/span&gt;&lt;span style=&#34;display:flex;&#34;&gt;&lt;span&gt;                   &lt;span style=&#34;color:#d14&#34;&gt;&amp;#34;postcards&amp;#34;&lt;/span&gt;, &lt;span style=&#34;color:#d14&#34;&gt;&amp;#34;blogdown&amp;#34;&lt;/span&gt;))&#xA;&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;/div&gt;&lt;p&gt;You&amp;rsquo;ll also need to install the development version of the &lt;code&gt;rmarkdown&lt;/code&gt; package:&lt;/p&gt;&#xA;&lt;div class=&#34;highlight&#34;&gt;&lt;pre tabindex=&#34;0&#34; style=&#34;background-color:#fff;-moz-tab-size:4;-o-tab-size:4;tab-size:4;&#34;&gt;&lt;code class=&#34;language-r&#34; data-lang=&#34;r&#34;&gt;&lt;span style=&#34;display:flex;&#34;&gt;&lt;span&gt;&lt;span style=&#34;color:#000;font-weight:bold&#34;&gt;&amp;gt;&lt;/span&gt; remotes&lt;span style=&#34;color:#000;font-weight:bold&#34;&gt;::&lt;/span&gt;&lt;span style=&#34;color:#900;font-weight:bold&#34;&gt;install_github&lt;/span&gt;(&lt;span style=&#34;color:#d14&#34;&gt;&amp;#34;rmarkdown&amp;#34;&lt;/span&gt;)&#xA;&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;/div&gt;&lt;/li&gt;&#xA;&lt;/ul&gt;&#xA;&#xA;&#xA;&#xA;&#xA;&lt;h2 id=&#34;install-hugo&#34;&gt;Install Hugo&#xA;  &lt;a href=&#34;#install-hugo&#34;&gt;&lt;svg class=&#34;anchor-symbol&#34; aria-hidden=&#34;true&#34; height=&#34;26&#34; width=&#34;26&#34; viewBox=&#34;0 0 22 22&#34; xmlns=&#34;http://www.w3.org/2000/svg&#34;&gt;&#xA;      &lt;path d=&#34;M0 0h24v24H0z&#34; fill=&#34;currentColor&#34;&gt;&lt;/path&gt;&#xA;      &lt;path d=&#34;M3.9 12c0-1.71 1.39-3.1 3.1-3.1h4V7H7c-2.76.0-5 2.24-5 5s2.24 5 5 5h4v-1.9H7c-1.71.0-3.1-1.39-3.1-3.1zM8 13h8v-2H8v2zm9-6h-4v1.9h4c1.71.0 3.1 1.39 3.1 3.1s-1.39 3.1-3.1 3.1h-4V17h4c2.76.0 5-2.24 5-5s-2.24-5-5-5z&#34;&gt;&lt;/path&gt;&#xA;    &lt;/svg&gt;&lt;/a&gt;&#xA;&lt;/h2&gt;&#xA;&lt;p&gt;To use blogdown, please install Hugo:&lt;/p&gt;&#xA;&lt;div class=&#34;highlight&#34;&gt;&lt;pre tabindex=&#34;0&#34; style=&#34;background-color:#fff;-moz-tab-size:4;-o-tab-size:4;tab-size:4;&#34;&gt;&lt;code class=&#34;language-r&#34; data-lang=&#34;r&#34;&gt;&lt;span style=&#34;display:flex;&#34;&gt;&lt;span&gt;&lt;span style=&#34;color:#000;font-weight:bold&#34;&gt;&amp;gt;&lt;/span&gt; blogdown&lt;span style=&#34;color:#000;font-weight:bold&#34;&gt;::&lt;/span&gt;&lt;span style=&#34;color:#900;font-weight:bold&#34;&gt;install_hugo&lt;/span&gt;()&#xA;&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;/div&gt;&lt;p&gt;And ensure your current version is at least as high as:&lt;/p&gt;&#xA;&lt;div class=&#34;highlight&#34;&gt;&lt;pre tabindex=&#34;0&#34; style=&#34;background-color:#fff;-moz-tab-size:4;-o-tab-size:4;tab-size:4;&#34;&gt;&lt;code class=&#34;language-r&#34; data-lang=&#34;r&#34;&gt;&lt;span style=&#34;display:flex;&#34;&gt;&lt;span&gt;&lt;span style=&#34;color:#000;font-weight:bold&#34;&gt;&amp;gt;&lt;/span&gt; &lt;span style=&#34;color:#900;font-weight:bold&#34;&gt;hugo_version&lt;/span&gt;()&#xA;&lt;/span&gt;&lt;/span&gt;&lt;span style=&#34;display:flex;&#34;&gt;&lt;span&gt;[1] ‘&lt;span style=&#34;color:#099&#34;&gt;0.79.0&lt;/span&gt;’&#xA;&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;/div&gt;&#xA;&#xA;&#xA;&#xA;&lt;h2 id=&#34;check-pandoc&#34;&gt;Check pandoc&#xA;  &lt;a href=&#34;#check-pandoc&#34;&gt;&lt;svg class=&#34;anchor-symbol&#34; aria-hidden=&#34;true&#34; height=&#34;26&#34; width=&#34;26&#34; viewBox=&#34;0 0 22 22&#34; xmlns=&#34;http://www.w3.org/2000/svg&#34;&gt;&#xA;      &lt;path d=&#34;M0 0h24v24H0z&#34; fill=&#34;currentColor&#34;&gt;&lt;/path&gt;&#xA;      &lt;path d=&#34;M3.9 12c0-1.71 1.39-3.1 3.1-3.1h4V7H7c-2.76.0-5 2.24-5 5s2.24 5 5 5h4v-1.9H7c-1.71.0-3.1-1.39-3.1-3.1zM8 13h8v-2H8v2zm9-6h-4v1.9h4c1.71.0 3.1 1.39 3.1 3.1s-1.39 3.1-3.1 3.1h-4V17h4c2.76.0 5-2.24 5-5s-2.24-5-5-5z&#34;&gt;&lt;/path&gt;&#xA;    &lt;/svg&gt;&lt;/a&gt;&#xA;&lt;/h2&gt;&#xA;&lt;p&gt;The RStudio IDE bundles an updated version of pandoc- if you did install v1.4 of the IDE, you should be all set!&lt;/p&gt;&#xA;&lt;div class=&#34;highlight&#34;&gt;&lt;pre tabindex=&#34;0&#34; style=&#34;background-color:#fff;-moz-tab-size:4;-o-tab-size:4;tab-size:4;&#34;&gt;&lt;code class=&#34;language-r&#34; data-lang=&#34;r&#34;&gt;&lt;span style=&#34;display:flex;&#34;&gt;&lt;span&gt;&lt;span style=&#34;color:#000;font-weight:bold&#34;&gt;&amp;gt;&lt;/span&gt; rmarkdown&lt;span style=&#34;color:#000;font-weight:bold&#34;&gt;::&lt;/span&gt;&lt;span style=&#34;color:#900;font-weight:bold&#34;&gt;pandoc_version&lt;/span&gt;()&#xA;&lt;/span&gt;&lt;/span&gt;&lt;span style=&#34;display:flex;&#34;&gt;&lt;span&gt;[1] ‘&lt;span style=&#34;color:#099&#34;&gt;2.11.3&lt;/span&gt;’&#xA;&lt;/span&gt;&lt;/span&gt;&lt;/code&gt;&lt;/pre&gt;&lt;/div&gt;</description>
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